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Intron Name: Anas_platyrhynchos_platyrhynchos_11_11834580_11835538_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11834580 - 11835538

Intron Length:

959

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTATGTTTT

5'SS Class:

weak_major

3'SS Sequence:

AACTTTCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

ATTCTCTGAAAA

Flanking Amino Acid:

MTFQKHLHEDELKETKRVHE

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.3

80.5

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

70.4

0.46

0.9

62.5

38.8

Minor 5ss

62.6

0.43

2.2

74.5

34.6

Minor BPS

58.4

0.26

1.5

69.67

35.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006348

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006610

11828063 - 11841495

13433