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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1196889_1197670_R


Intron Information:

Intron Rank:
48

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
1196889 - 1197670

Intron Length:
782

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAT|GTCATTATA

5'SS Class:
major

3'SS Sequence:
TGGGCACATGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTAGAA

U12 Branch Point Sequence:
ACAGCCAGAAAT

Flanking Amino Acid:
NLEMTRTVKLINTPGSFKCL

Intron Amino Acid Position:
1985

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
61.8
0.28
1.4
72.9
38

Major BPS
54.8
0.12
1.2
52.7
43.2

Major PPT
60.2
0.23
1.1
52
42.1

Minor 5ss
37.2
-1.4
2.8
47.9
40.7

Minor BPS
44.6
-0.3
1.9
58.76
43.5

Associated Gene:

Gene:
FBN1

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1177298 - 1339247
161950