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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1209858_1209971_R


Intron Information:

Intron Rank:
38

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1209858 - 1209971

Intron Length:
114

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGG|GTAATATTT

5'SS Class:
major

3'SS Sequence:
TTTGTTTGAACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTAAAT

U12 Branch Point Sequence:
TGTCTCTGAATT

Flanking Amino Acid:
RPNPITVILEDIDECQELPG

Intron Amino Acid Position:
1594

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.3
0.57
1.1
74.4
36.8

Major BPS
67.2
0.43
1.2
73.3
39.1

Major PPT
76
0.59
1
73.3
40.9

Minor 5ss
43.5
-0.7
3.1
57.2
46.9

Minor BPS
64.9
0.55
1.4
79.05
36.7

Associated Gene:

Gene:
FBN1

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1177298 - 1339247
161950