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Intron Name: Anas_platyrhynchos_platyrhynchos_11_12419339_12422882_F

Intron Information:

Intron Rank:

149539

Intron Class:

major

Intron Phase:

Intron Coordinates:

12419339 - 12422882

Intron Length:

3544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGACAT

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTAATCTAAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

71.6

40.1

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

93.6

0.98

0.6

92.5

25.6

Minor 5ss

32.2

-2

3.4

46.9

48.4

Minor BPS

57.2

0.2

1.7

67.33

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032374

12414983 - 12437728

22746