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Intron Name: Anas_platyrhynchos_platyrhynchos_11_12512853_12513551_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12512853 - 12513551

Intron Length:

699

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

TCTGTGGTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAGAC

U12 Branch Point Sequence:

GCTCAGATAACT

Flanking Amino Acid:

PWEMRIKKIESHFGSGVASY

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

80.8

33.6

Major BPS

61.5

0.29

58.7

38.1

Major PPT

64.8

0.33

1.2

67.2

Minor 5ss

40.6

-1.1

2.8

47.9

41.8

Minor BPS

43.5

-0.4

2.4

64.43

45.1

Associated Gene:

Gene:

TMC3

Ensembl Gene ID:

ENSAPLG00000011080

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030797

12506977 - 12528691

21715

ENSAPLT00000030429

12506977 - 12528691

21715

ENSAPLT00000011590

12506977 - 12528691

21715