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Intron Name: Anas_platyrhynchos_platyrhynchos_11_12513659_12514672_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12513659 - 12514672

Intron Length:

1014

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAATG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTTCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TTTTTCAGACCT

Flanking Amino Acid:

MTGAFVVLPELLAGAPFGST

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.6

0.8

84.6

33.3

Major BPS

0.65

1.5

85.7

34.9

Major PPT

86.3

0.82

0.7

79.8

32.2

Minor 5ss

37.1

-1.5

48.5

47.2

Minor BPS

52.9

0.17

81.51

39.8

Associated Gene:

Gene:

TMC3

Ensembl Gene ID:

ENSAPLG00000011080

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030797

12506977 - 12528691

21715

ENSAPLT00000030429

12506977 - 12528691

21715

ENSAPLT00000011590

12506977 - 12528691

21715