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Intron Name: Anas_platyrhynchos_platyrhynchos_11_12519102_12521020_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12519102 - 12521020

Intron Length:

1919

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTTTA

5'SS Class:

major

3'SS Sequence:

ATATGTATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATGTAT

U12 Branch Point Sequence:

TGTGTTGGAACG

Flanking Amino Acid:

LDKVNIMSDAEMLKLSIIDM

Intron Amino Acid Position:

431

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.1

77.4

33.6

Major BPS

63.7

0.34

1.4

63.7

43.9

Major PPT

0.56

71.1

43.4

Minor 5ss

46.7

-0.3

2.8

68.1

42.7

Minor BPS

43.3

-0.6

2.1

51.88

43.1

Associated Gene:

Gene:

TMC3

Ensembl Gene ID:

ENSAPLG00000011080

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030429

12506977 - 12528691

21715