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Intron Name: Anas_platyrhynchos_platyrhynchos_11_12521889_12522123_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12521889 - 12522123

Intron Length:

235

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGTAAT

5'SS Class:

strong_major

3'SS Sequence:

ATTATTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

ATTACATTATTT

Flanking Amino Acid:

LHLVYNQGMIWMGAFFSPCL

Intron Amino Acid Position:

576

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

0.9

81.4

31.6

Major BPS

73.9

0.59

30.2

Major PPT

86.5

0.82

0.8

81.2

35.6

Minor 5ss

43.6

-0.7

2.6

56.3

42.5

Minor BPS

55.1

0.24

1.9

76.63

39.8

Associated Gene:

Gene:

TMC3

Ensembl Gene ID:

ENSAPLG00000011080

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030797

12506977 - 12528691

21715

ENSAPLT00000030429

12506977 - 12528691

21715

ENSAPLT00000011590

12506977 - 12528691

21715