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Intron Name: Anas_platyrhynchos_platyrhynchos_11_12522253_12523301_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12522253 - 12523301

Intron Length:

1049

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTTAGTCAA

5'SS Class:

major

3'SS Sequence:

TGCCTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATAAT

U12 Branch Point Sequence:

ATAATCTGAAAC

Flanking Amino Acid:

VPHQQVFRASRSNNFYLAML

Intron Amino Acid Position:

619

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.55

1.2

66.6

40.5

Major BPS

70.1

0.5

1.3

72.3

40.4

Major PPT

82.1

0.72

0.8

76.5

32.1

Minor 5ss

30.4

-2.2

2.7

40.8

Minor BPS

50.9

0.01

1.6

60.9

37.2

Associated Gene:

Gene:

TMC3

Ensembl Gene ID:

ENSAPLG00000011080

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030429

12506977 - 12528691

21715

ENSAPLT00000011590

12506977 - 12528691

21715

ENSAPLT00000030797

12506977 - 12528691

21715