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Intron Name: Anas_platyrhynchos_platyrhynchos_11_12523413_12523917_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12523413 - 12523917

Intron Length:

505

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTCCTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TACAATTTAATT

Flanking Amino Acid:

YKPSLNCGPFSGQEKIYDIV

Intron Amino Acid Position:

656

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.13

0.6

93.1

14.6

Major BPS

90.7

1.01

0.7

19.9

Major PPT

78.7

0.65

0.7

73.8

24.5

Minor 5ss

41.9

-0.9

2.9

57.8

46.8

Minor BPS

58.1

0.33

1.5

70.67

40.5

Associated Gene:

Gene:

TMC3

Ensembl Gene ID:

ENSAPLG00000011080

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030429

12506977 - 12528691

21715

ENSAPLT00000011590

12506977 - 12528691

21715