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Intron Name: Anas_platyrhynchos_platyrhynchos_11_12525408_12525604_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12525408 - 12525604

Intron Length:

197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

GAATGCATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTCCTGAATG

Flanking Amino Acid:

NNQLRMKIQTERTEDKKKVV

Intron Amino Acid Position:

725

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

74.8

35.3

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

61.3

0.26

56.2

Minor 5ss

38.2

-1.3

2.7

49.5

40.3

Minor BPS

70.4

0.5

1.5

72.16

Associated Gene:

Gene:

TMC3

Ensembl Gene ID:

ENSAPLG00000011080

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030429

12506977 - 12528691

21715

ENSAPLT00000011590

12506977 - 12528691

21715

ENSAPLT00000030797

12506977 - 12528691

21715