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Intron Name: Anas_platyrhynchos_platyrhynchos_11_12525648_12526721_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12525648 - 12526721

Intron Length:

1074

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

AGTGTAATAATT

Flanking Amino Acid:

DKKKVVQMAVARIQNLGGND

Intron Amino Acid Position:

739

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

29.3

Major BPS

0.75

78.6

Major PPT

83.6

0.76

0.8

76.8

37.4

Minor 5ss

41.9

-0.9

2.9

58.7

45.8

Minor BPS

46.3

-0.2

1.9

64.9

39.6

Associated Gene:

Gene:

TMC3

Ensembl Gene ID:

ENSAPLG00000011080

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030429

12506977 - 12528691

21715

ENSAPLT00000011590

12506977 - 12528691

21715

ENSAPLT00000030797

12506977 - 12528691

21715