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Intron Name: Anas_platyrhynchos_platyrhynchos_11_12529855_12529905_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12529855 - 12529905

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGGGGGGT

5'SS Class:

major

3'SS Sequence:

CATCCCCGCAGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CAGCTCTCACCC

Flanking Amino Acid:

WRGCRSTGTRGEVVVSWRPS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.6

0.37

1.1

54.8

44.4

Major BPS

72.7

0.56

30.1

Major PPT

46.8

-0.1

1.6

49.3

33.8

Minor 5ss

23.7

-3

3.6

28.2

Minor BPS

44.4

-0.4

1.8

48.57

41.3

Associated Gene:

Gene:

STARD5

Ensembl Gene ID:

ENSAPLG00000018308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029793

12526622 - 12535827

9206

ENSAPLT00000021624

12527538 - 12533235

5698