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Intron Name: Anas_platyrhynchos_platyrhynchos_11_12529954_12530052_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12529954 - 12530052

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTGAGTACA

5'SS Class:

major

3'SS Sequence:

CGCCCTGCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTGGAG

U12 Branch Point Sequence:

TTTGCTTTCGTT

Flanking Amino Acid:

WRPSAEFSGNVYRAEGTVAA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

69.7

36.3

Major BPS

-0.8

1.7

28.5

45.1

Major PPT

63.6

0.31

0.9

56.6

33.4

Minor 5ss

32.6

-2

2.7

35.6

40.5

Minor BPS

-0.5

3.6

74.98

42.9

Associated Gene:

Gene:

STARD5

Ensembl Gene ID:

ENSAPLG00000018308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029793

12526622 - 12535827

9206

ENSAPLT00000021624

12527538 - 12533235

5698