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Intron Name: Anas_platyrhynchos_platyrhynchos_11_12530186_12531517_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12530186 - 12531517

Intron Length:

1332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTTCC

5'SS Class:

major

3'SS Sequence:

TTGTAATTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

GGCTTTGTAATT

Flanking Amino Acid:

DFEVVEAVSDAVSVCRTTTP

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

30.6

Major BPS

84.4

0.85

1.1

34.5

Major PPT

75.3

0.57

0.9

66.9

43.8

Minor 5ss

38.4

-1.3

2.9

49.6

39.8

Minor BPS

48.5

-0

64.11

41.2

Associated Gene:

Gene:

STARD5

Ensembl Gene ID:

ENSAPLG00000018308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021624

12527538 - 12533235

5698

ENSAPLT00000029793

12526622 - 12535827

9206