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Intron Name: Anas_platyrhynchos_platyrhynchos_11_12532529_12533087_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12532529 - 12533087

Intron Length:

559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

ATTGTCGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAA

U12 Branch Point Sequence:

CTGGCTATAAAA

Flanking Amino Acid:

PCGCFCIPLPGEPDKTQLLS

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.86

0.9

38.6

Major BPS

65.3

0.38

71.6

30.1

Major PPT

76.8

0.6

69.9

40.9

Minor 5ss

34.7

-1.7

2.6

34.1

41.4

Minor BPS

47.3

-0.2

1.8

56.88

42.7

Associated Gene:

Gene:

STARD5

Ensembl Gene ID:

ENSAPLG00000018308

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022156

12531173 - 12533235

2063

ENSAPLT00000021624

12527538 - 12533235

5698