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Intron Name: Anas_platyrhynchos_platyrhynchos_11_12538613_12539289_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12538613 - 12539289

Intron Length:

677

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATCAA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTGCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

ATGTTCTTAACA

Flanking Amino Acid:

VKSLDEATLKEFDDIHVTIL

Intron Amino Acid Position:

1242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

76.5

34.2

Major BPS

82.2

0.8

71.9

35.8

Major PPT

71.4

0.48

0.9

65.2

36.2

Minor 5ss

32.9

-2

40.7

45.5

Minor BPS

80.3

0.95

1.1

81.3

Associated Gene:

Gene:

IL16

Ensembl Gene ID:

ENSAPLG00000011013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041911

12536379 - 12541789

5411

ENSAPLT00000011509

12536827 - 12571639

34813