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Intron Name: Anas_platyrhynchos_platyrhynchos_11_12546601_12547530_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12546601 - 12547530

Intron Length:

930

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCATTG

5'SS Class:

weak_major

3'SS Sequence:

TGATATTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATAAC

U12 Branch Point Sequence:

AATCTTGTAAGA

Flanking Amino Acid:

IIISRHPEPQVSEQQLKEAV

Intron Amino Acid Position:

580

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.2

65.1

41.6

Major BPS

60.2

0.25

1.3

39.8

Major PPT

0.45

0.9

62.2

43.8

Minor 5ss

61.2

0.38

2.4

73.4

43.4

Minor BPS

44.2

-0.4

2.1

55.45

37.6

Associated Gene:

Gene:

IL16

Ensembl Gene ID:

ENSAPLG00000011013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011509

12536827 - 12571639

34813