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Intron Name: Anas_platyrhynchos_platyrhynchos_11_12555054_12557073_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12555054 - 12557073

Intron Length:

2020

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCATG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGTCTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

GTTTGTCTTAAG

Flanking Amino Acid:

RLVNVVMASKETSTCKERPL

Intron Amino Acid Position:

245

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

75.5

40.6

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

72.5

0.51

1.1

75.9

38.3

Minor 5ss

44.7

-0.6

2.9

58.1

40.6

Minor BPS

39.8

-0.9

2.3

49.95

43.6

Associated Gene:

Gene:

IL16

Ensembl Gene ID:

ENSAPLG00000011013

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011509

12536827 - 12571639

34813