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Intron Name: Anas_platyrhynchos_platyrhynchos_11_12732930_12733896_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12732930 - 12733896

Intron Length:

967

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTACGTGCC

5'SS Class:

major

3'SS Sequence:

TTTGGCTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAAGAT

U12 Branch Point Sequence:

ATTAACTGACTT

Flanking Amino Acid:

YRVRFLCGSSVKPKLTVTID

Intron Amino Acid Position:

405

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

67.8

38.7

Major BPS

58.6

0.22

1.1

55.1

40.4

Major PPT

84.3

0.77

0.8

36.6

Minor 5ss

-1.9

3.3

41.5

40.3

Minor BPS

47.6

-0.1

1.9

69.32

41.3

Associated Gene:

Gene:

CEMIP

Ensembl Gene ID:

ENSAPLG00000010943

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011434

12695863 - 12746384

50522