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Intron Name: Anas_platyrhynchos_platyrhynchos_11_12887339_12887497_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12887339 - 12887497

Intron Length:

159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAAATTT

5'SS Class:

strong_major

3'SS Sequence:

TGTATCTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTGTAT

U12 Branch Point Sequence:

TGTATCTCAACA

Flanking Amino Acid:

DGLSSYDLSQVPVPSIPANV

Intron Amino Acid Position:

478

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

0.9

28.3

Major BPS

56.3

0.16

1.5

57.4

49.1

Major PPT

71.9

0.49

66.6

39.4

Minor 5ss

37.8

-1.4

3.4

55.7

48.5

Minor BPS

63.5

0.42

1.6

73.23

38.1

Associated Gene:

Gene:

ARNT2

Ensembl Gene ID:

ENSAPLG00000010837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023489

12872636 - 12975112

102477

ENSAPLT00000022314

12872636 - 12975112

102477

ENSAPLT00000042577

12872636 - 12975112

102477

ENSAPLT00000011329

12872636 - 12975112

102477

ENSAPLT00000037640

12872636 - 12975112

102477

ENSAPLT00000036994

12873009 - 12982844

109836