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Intron Name: Anas_platyrhynchos_platyrhynchos_11_12901961_12902830_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12901961 - 12902830

Intron Length:

870

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGAG

5'SS Class:

major

3'SS Sequence:

TGTTTTATTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

TTTGTTTTATTC

Flanking Amino Acid:

CISVIGYQPQDLLGKDILEF

Intron Amino Acid Position:

378

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

1.3

72.3

39.5

Major BPS

73.5

0.59

81.3

29.9

Major PPT

81.7

0.71

0.8

74.7

Minor 5ss

27.4

-2.6

2.9

31.5

42.8

Minor BPS

56.8

0.19

1.6

68.82

37.9

Associated Gene:

Gene:

ARNT2

Ensembl Gene ID:

ENSAPLG00000010837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023489

12872636 - 12975112

102477

ENSAPLT00000022314

12872636 - 12975112

102477

ENSAPLT00000042577

12872636 - 12975112

102477

ENSAPLT00000011329

12872636 - 12975112

102477

ENSAPLT00000037640

12872636 - 12975112

102477

ENSAPLT00000036994

12873009 - 12982844

109836