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Intron Name: Anas_platyrhynchos_platyrhynchos_11_12917215_12935610_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12917215 - 12935610

Intron Length:

18396

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGATAT

5'SS Class:

major

3'SS Sequence:

CTTGATTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TCTTCCTTGATT

Flanking Amino Acid:

QLCTSENSMTGRILDLKTGT

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

1.2

77.7

33.3

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

77.6

0.62

0.9

69.5

41.4

Minor 5ss

-1.7

3.1

47.6

47.9

Minor BPS

83.5

1.13

90.9

33.1

Associated Gene:

Gene:

ARNT2

Ensembl Gene ID:

ENSAPLG00000010837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036994

12873009 - 12982844

109836

ENSAPLT00000023489

12872636 - 12975112

102477

ENSAPLT00000022314

12872636 - 12975112

102477

ENSAPLT00000042577

12872636 - 12975112

102477

ENSAPLT00000011329

12872636 - 12975112

102477

ENSAPLT00000037640

12872636 - 12975112

102477