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Intron Name: Anas_platyrhynchos_platyrhynchos_11_12938307_12944140_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12938307 - 12944140

Intron Length:

5834

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

TCTAAATGATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTAAAT

U12 Branch Point Sequence:

GTTTCTCTAAAT

Flanking Amino Acid:

EDGEGPSKFSRENHSEIERR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.8

38.7

Major BPS

69.8

0.49

1.1

75.5

35.2

Major PPT

61.7

0.26

1.1

59.5

44.8

Minor 5ss

38.4

-1.3

3.3

55.8

48.4

Minor BPS

63.8

0.51

1.8

83.05

37.5

Associated Gene:

Gene:

ARNT2

Ensembl Gene ID:

ENSAPLG00000010837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023489

12872636 - 12975112

102477