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Intron Name: Anas_platyrhynchos_platyrhynchos_11_12940872_12940982_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12940872 - 12940982

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCGTG

5'SS Class:

major

3'SS Sequence:

ATTTTGTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTTAT

U12 Branch Point Sequence:

TGTGCGTTAGCT

Flanking Amino Acid:

QISGDKEKFARWEDDQSTAD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

1.1

67.1

44.6

Major BPS

66.2

0.4

1.3

57.4

49.1

Major PPT

81.6

0.71

0.8

Minor 5ss

38.6

-1.3

3.7

54.5

49.7

Minor BPS

50.3

0.09

2.4

76.57

45.8

Associated Gene:

Gene:

ARNT2

Ensembl Gene ID:

ENSAPLG00000010837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036994

12873009 - 12982844

109836

ENSAPLT00000026575

12931469 - 12975112

43644

ENSAPLT00000022314

12872636 - 12975112

102477

ENSAPLT00000042577

12872636 - 12975112

102477