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Intron Name: Anas_platyrhynchos_platyrhynchos_11_12941028_12944140_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12941028 - 12944140

Intron Length:

3113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

TTTTGTTTATAG

Flanking Amino Acid:

EDGEGPSKFSRYDGDQISGD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.8

38.7

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

84.6

0.78

0.8

79.9

32.3

Minor 5ss

38.4

-1.3

3.3

55.8

48.4

Minor BPS

49.2

-0.1

2.1

64.12

Associated Gene:

Gene:

ARNT2

Ensembl Gene ID:

ENSAPLG00000010837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036994

12873009 - 12982844

109836

ENSAPLT00000026575

12931469 - 12975112

43644

ENSAPLT00000022314

12872636 - 12975112

102477

ENSAPLT00000011329

12872636 - 12975112

102477

ENSAPLT00000042577

12872636 - 12975112

102477