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Intron Name: Anas_platyrhynchos_platyrhynchos_11_12950493_12975081_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12950493 - 12975081

Intron Length:

24589

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTATTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGTAT

U12 Branch Point Sequence:

TTTTCCCTACTT

Flanking Amino Acid:

MATPAAVNPPEMASDIPGSV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

72.6

38.9

Major BPS

58.9

0.22

1.5

59.6

46.8

Major PPT

82.7

0.74

0.9

76.7

36.2

Minor 5ss

31.1

-2.2

2.7

37.6

Minor BPS

65.5

0.57

1.9

88.6

36.6

Associated Gene:

Gene:

ARNT2

Ensembl Gene ID:

ENSAPLG00000010837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011329

12872636 - 12975112

102477

ENSAPLT00000037640

12872636 - 12975112

102477

ENSAPLT00000026575

12931469 - 12975112

43644

ENSAPLT00000023489

12872636 - 12975112

102477

ENSAPLT00000022314

12872636 - 12975112

102477

ENSAPLT00000042577

12872636 - 12975112

102477