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Intron Name: Anas_platyrhynchos_platyrhynchos_11_13267815_13318936_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

13267815 - 13318936

Intron Length:

51122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGGG

5'SS Class:

major

3'SS Sequence:

TGTGTTGTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

CTTTTTTTGTTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.3

67.1

44.6

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

74.9

0.56

69.5

41.6

Minor 5ss

27.5

-2.6

2.9

32.4

42.2

Minor BPS

44.1

-0.3

3.4

73.17

Associated Gene:

Gene:

MINAR1

Ensembl Gene ID:

ENSAPLG00000015986

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042895

13259752 - 13319561

59810