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Intron Name: Anas_platyrhynchos_platyrhynchos_11_13342018_13342094_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13342018 - 13342094

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TGGTGTTTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAG

U12 Branch Point Sequence:

GTGCTCTCAGCC

Flanking Amino Acid:

AQPGPREAPTSHAVHLHAAG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

75.3

34.6

Major BPS

58.6

0.22

1.5

38.9

Major PPT

0.65

72.9

42.2

Minor 5ss

30.4

-2.2

3.2

42.4

44.3

Minor BPS

47.3

-0.2

1.8

56.78

41.5

Associated Gene:

Gene:

PLIN1

Ensembl Gene ID:

ENSAPLG00000015729

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046161

13341806 - 13354728

12923