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Intron Name: Anas_platyrhynchos_platyrhynchos_11_13351977_13352444_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13351977 - 13352444

Intron Length:

468

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTGCCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCGAG

U12 Branch Point Sequence:

TTTGCCCCCACA

Flanking Amino Acid:

QELVTWIPIVGSLAKPSAPQ

Intron Amino Acid Position:

387

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

71.1

32.7

Major BPS

38.1

-0.7

1.4

29.4

34.2

Major PPT

76.2

0.59

0.8

69.5

31.3

Minor 5ss

28.6

-2.4

32.8

35.9

Minor BPS

46.4

-0.2

2.3

68.3

43.9

Associated Gene:

Gene:

PLIN1

Ensembl Gene ID:

ENSAPLG00000015729

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046161

13341806 - 13354728

12923