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Intron Name: Anas_platyrhynchos_platyrhynchos_11_13353410_13353850_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13353410 - 13353850

Intron Length:

441

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

AGCCAGCTCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAA

U12 Branch Point Sequence:

CGCCGCTCAAGC

Flanking Amino Acid:

LLGTLYSYVPLRRQSVKDEA

Intron Amino Acid Position:

516

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

80.5

29.7

Major BPS

58.2

0.2

1.1

37.5

Major PPT

60.1

0.23

54.1

40.6

Minor 5ss

38.8

-1.3

2.9

49.9

46.4

Minor BPS

40.5

-0.7

2.1

44.44

43.6

Associated Gene:

Gene:

PLIN1

Ensembl Gene ID:

ENSAPLG00000015729

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046161

13341806 - 13354728

12923