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Intron Name: Anas_platyrhynchos_platyrhynchos_11_13360344_13360477_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
13360344 - 13360477

Intron Length:
134

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCG|GTACGTGTG

5'SS Class:
major

3'SS Sequence:
TTTGCCGTTGCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCCTTAC

U12 Branch Point Sequence:
CATCCCTTACGG

Flanking Amino Acid:
QIREDDKGNVVLSGVKESEV

Intron Amino Acid Position:
169

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77
0.64
1.1
67.6
43.8

Major BPS
56.6
0.16
1.1
48.9
36.2

Major PPT
79.6
0.67
0.9
73.2
37.1

Minor 5ss
35.7
-1.6
3.5
49.2
47

Minor BPS
48.1
-0.2
2
53.69
46.9

Associated Gene:

Gene:
KIF7

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

13359378 - 13368125
8748