Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_13362210_13362554_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13362210 - 13362554

Intron Length:

345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGACGAGG

5'SS Class:

major

3'SS Sequence:

ATTTTGGGGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTGTAT

U12 Branch Point Sequence:

CTCTCTTGTATT

Flanking Amino Acid:

TRGSKLAKGQVNTEKGCESI

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.2

60.4

45.8

Major BPS

59.2

0.23

1.4

61.1

45.5

Major PPT

61.6

0.26

1.2

57.3

Minor 5ss

31.8

-2.1

3.1

39.7

45.9

Minor BPS

49.6

0.05

1.8

67.82

43.6

Associated Gene:

Gene:

KIF7

Ensembl Gene ID:

ENSAPLG00000015562

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016245

13359378 - 13368125

8748