Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_13379974_13380502_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13379974 - 13380502

Intron Length:

529

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAG|GCGAGTACT

5'SS Class:

strong_major

3'SS Sequence:

GCTTCCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTAAA

U12 Branch Point Sequence:

GTTTAGTTGACT

Flanking Amino Acid:

EKEKALKISIDFKTEEELQA

Intron Amino Acid Position:

641

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.8

89.9

21.7

Major BPS

60.1

0.25

1.3

61.7

43.1

Major PPT

80.1

0.68

0.8

73.3

31.6

Minor 5ss

22.6

-3.2

3.5

34.1

41.4

Minor BPS

56.1

0.27

2.3

81.22

40.3

Associated Gene:

Gene:

TICRR

Ensembl Gene ID:

ENSAPLG00000015247

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015912

13369593 - 13386503

16911