Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_13381575_13382345_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13381575 - 13382345

Intron Length:

771

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTTCTT

5'SS Class:

major

3'SS Sequence:

CTCTTTTATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TCTTTTTTGATA

Flanking Amino Acid:

GASSDLMESFRLLQAPCANE

Intron Amino Acid Position:

522

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

74.8

41.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

79.9

0.67

0.8

30.6

Minor 5ss

39.2

-1.2

3.3

59.3

45.1

Minor BPS

68.3

0.57

1.1

72.69

33.6

Associated Gene:

Gene:

TICRR

Ensembl Gene ID:

ENSAPLG00000015247

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015912

13369593 - 13386503

16911