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Intron Name: Anas_platyrhynchos_platyrhynchos_11_13395286_13395957_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13395286 - 13395957

Intron Length:

672

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

GTTATTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGAGAT

U12 Branch Point Sequence:

ACTCCCTGAGAT

Flanking Amino Acid:

MLQKKGKLDMVHIQNATLAG

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

65.4

Major BPS

51.7

0.04

1.3

50.1

44.2

Major PPT

83.1

0.74

0.8

77.4

36.8

Minor 5ss

38.9

-1.2

2.8

45.7

43.7

Minor BPS

48.5

-0

1.8

66.65

43.2

Associated Gene:

Gene:

RHCG

Ensembl Gene ID:

ENSAPLG00000014860

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015505

13390418 - 13398261

7844