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Intron Name: Anas_platyrhynchos_platyrhynchos_11_13396096_13396450_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13396096 - 13396450

Intron Length:

355

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CCCTTCCCTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

TGTCTCTGATCT

Flanking Amino Acid:

VSTVGYVYLTPVLESRLHIQ

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

75.3

34.6

Major BPS

79.7

0.74

79.6

35.6

Major PPT

79.9

0.67

0.7

76.8

25.3

Minor 5ss

30.4

-2.2

3.2

42.4

44.3

Minor BPS

54.6

0.22

1.7

75.13

41.1

Associated Gene:

Gene:

RHCG

Ensembl Gene ID:

ENSAPLG00000014860

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015505

13390418 - 13398261

7844