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Intron Name: Anas_platyrhynchos_platyrhynchos_11_13397272_13398016_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13397272 - 13398016

Intron Length:

745

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

CGGCTTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTGAC

U12 Branch Point Sequence:

GCCCCTTGACCA

Flanking Amino Acid:

LMAFAGGALVGAILKLPIWG

Intron Amino Acid Position:

422

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.9

77.9

38.6

Major BPS

61.6

0.29

1.1

54.6

40.8

Major PPT

75.5

0.57

0.9

68.9

37.1

Minor 5ss

38.7

-1.3

2.8

47.8

47.9

Minor BPS

45.4

-0.3

1.7

49.91

41.3

Associated Gene:

Gene:

RHCG

Ensembl Gene ID:

ENSAPLG00000014860

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015505

13390418 - 13398261

7844