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Intron Name: Anas_platyrhynchos_platyrhynchos_11_13398091_13398195_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13398091 - 13398195

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCCT

5'SS Class:

strong_major

3'SS Sequence:

CATGGCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAA

U12 Branch Point Sequence:

CGGAGCTGAAGG

Flanking Amino Acid:

NCFEDDIYWEVPEDEESDVY

Intron Amino Acid Position:

447

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

72.1

39.1

Major BPS

58.2

0.2

1.1

49.1

Major PPT

70.3

0.46

39.5

Minor 5ss

27.9

-2.5

3.2

39.3

46.1

Minor BPS

39.1

-0.9

2.1

37.33

44.7

Associated Gene:

Gene:

RHCG

Ensembl Gene ID:

ENSAPLG00000014860

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015505

13390418 - 13398261

7844