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Intron Name: Anas_platyrhynchos_platyrhynchos_11_13506607_13506679_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13506607 - 13506679

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACCTTC

5'SS Class:

weak_major

3'SS Sequence:

TTTGCTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTAAA

U12 Branch Point Sequence:

TACACCTAAAAG

Flanking Amino Acid:

SSKESLAYGKGELNGEEFKK

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.2

73.2

39.3

Major BPS

63.9

0.35

63.9

30.3

Major PPT

86.1

0.81

0.7

85.1

29.7

Minor 5ss

63.9

0.47

2.4

76.5

39.2

Minor BPS

-0.2

1.9

54.65

45.8

Associated Gene:

Gene:

FANCI

Ensembl Gene ID:

ENSAPLG00000004948

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017528

13504153 - 13508132

3980

ENSAPLT00000005210

13490985 - 13508132

17148