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Intron Name: Anas_platyrhynchos_platyrhynchos_11_13513115_13513290_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13513115 - 13513290

Intron Length:

176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

CCCCTCGCGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

TCTCTGCTGAGG

Flanking Amino Acid:

PFLKSKLLERVFVHGEELES

Intron Amino Acid Position:

315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

65.8

40.2

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

60.6

0.24

36.7

Minor 5ss

27.1

-2.6

2.9

24.3

36.8

Minor BPS

36.9

-1.1

2.4

43.79

42.3

Associated Gene:

Gene:

RLBP1

Ensembl Gene ID:

ENSAPLG00000005741

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005964

13510891 - 13513449

2559