Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_13567139_13567231_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13567139 - 13567231

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCC|GTAAGTCCC

5'SS Class:

major

3'SS Sequence:

TCCGTGCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTCAC

U12 Branch Point Sequence:

TGGTCACGTATG

Flanking Amino Acid:

SPFFGRSCHVRCAVPLGMEG

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.8

0.42

1.4

Major BPS

59.8

0.24

1.3

63.1

44.5

Major PPT

67.2

0.39

0.9

57.5

38.6

Minor 5ss

37.4

-1.4

2.9

50.8

38.5

Minor BPS

37.5

-1.1

2.1

43.03

42.1

Associated Gene:

Gene:

MFGE8

Ensembl Gene ID:

ENSAPLG00000011015

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030395

13564255 - 13572479

8225

ENSAPLT00000011486

13564270 - 13572479

8210