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Intron Name: Anas_platyrhynchos_platyrhynchos_11_13609100_13629115_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

13609100 - 13629115

Intron Length:

20016

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGGT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATAAA

U12 Branch Point Sequence:

CTGTCATAAATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.9

76.9

38.6

Major BPS

0.4

1.1

66.5

36.3

Major PPT

89.3

0.88

0.7

84.9

29.9

Minor 5ss

30.9

-2.2

3.6

46.8

48.5

Minor BPS

50.5

-0

62.88

43.2

Associated Gene:

Gene:

ACAN

Ensembl Gene ID:

ENSAPLG00000011257

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018919

13584490 - 13629372

44883

ENSAPLT00000011772

13584490 - 13629372

44883