Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_1366912_1367111_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1366912 - 1367111

Intron Length:

200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CCTGGAACTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTAAA

U12 Branch Point Sequence:

TTTCCTGGAACT

Flanking Amino Acid:

FDEDKQEALDRCERTYQRHH

Intron Amino Acid Position:

702

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

72.7

44.5

Major BPS

59.8

0.24

1.2

61.9

33.9

Major PPT

60.1

0.23

0.9

51.9

Minor 5ss

36.4

-1.5

3.3

47.2

Minor BPS

55.5

0.25

2.1

82.32

38.9

Associated Gene:

Gene:

CEP152

Ensembl Gene ID:

ENSAPLG00000005273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033593

1358010 - 1378314

20305

ENSAPLT00000005496

1358010 - 1378314

20305