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Intron Name: Anas_platyrhynchos_platyrhynchos_11_13701369_13704844_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13701369 - 13704844

Intron Length:

3476

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGAAC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTAAT

U12 Branch Point Sequence:

ACAGCCCTAATG

Flanking Amino Acid:

RPKTCGDHPIRFYARDSGLL

Intron Amino Acid Position:

448

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

73.2

37.8

Major BPS

69.6

0.49

1.1

69.5

Major PPT

86.6

0.82

0.7

84.4

23.5

Minor 5ss

31.5

-2.1

3.3

42.1

44.9

Minor BPS

48.4

-0.2

1.8

51.11

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012795

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021869

13695454 - 13705761

10308

ENSAPLT00000013326

13695454 - 13705152

9699

ENSAPLT00000044432

13695454 - 13705951

10498