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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1373111_1373411_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1373111 - 1373411

Intron Length:
301

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACTATAA

5'SS Class:
major

3'SS Sequence:
ACTCTTCCTACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCTAAT

U12 Branch Point Sequence:
GCTACTCTAATA

Flanking Amino Acid:
IQTLTAKEEQIVKQSKVAEV

Intron Amino Acid Position:
350

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.2
0.52
1.1
66.9
34.7

Major BPS
82.2
0.8
0.9
81.6
27

Major PPT
79.8
0.67
0.8
73
31.3

Minor 5ss
36.3
-1.6
3.2
47.5
47.9

Minor BPS
51.5
0.04
1.7
61.33
39

Associated Gene:

Gene:
CEP152

Ensembl Gene ID:

Chromosome:
11

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1358010 - 1378314
20305

1358010 - 1378314
20305