Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_13831498_13833246_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13831498 - 13833246

Intron Length:

1749

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTCCC

5'SS Class:

major

3'SS Sequence:

TTTTTCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTGAC

U12 Branch Point Sequence:

ACTGCCTTGACT

Flanking Amino Acid:

THKPEEDTFGVSIAVGLAAF

Intron Amino Acid Position:

432

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

65.8

40.2

Major BPS

61.6

0.29

1.1

54.6

40.8

Major PPT

92.7

0.96

0.6

85.4

29.3

Minor 5ss

29.6

-2.3

2.7

28.8

35.5

Minor BPS

72.7

0.79

1.4

81.27

40.7

Associated Gene:

Gene:

NTRK3

Ensembl Gene ID:

ENSAPLG00000013271

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013894

13772156 - 13962239

190084