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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1384648_1385351_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1384648 - 1385351

Intron Length:

704

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAACA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTCATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAT

U12 Branch Point Sequence:

TAATCTTAAATT

Flanking Amino Acid:

HLLLVDPEGKVRTKDHIFDS

Intron Amino Acid Position:

581

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

76.1

32.7

Major BPS

0.72

78.4

31.2

Major PPT

77.4

0.62

0.8

78.4

28.9

Minor 5ss

39.8

-1.1

2.8

Minor BPS

64.4

0.53

1.6

77.68

39.1

Associated Gene:

Gene:

SHC4

Ensembl Gene ID:

ENSAPLG00000004896

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005091

1383412 - 1414568

31157