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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1406983_1413989_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1406983 - 1413989

Intron Length:

7007

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTCCCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATCAT

U12 Branch Point Sequence:

CAGTCATCATTT

Flanking Amino Acid:

GEPGAMYGVRYMGCIEVLQS

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

80.5

33.9

Major BPS

75.6

0.64

1.1

76.2

37.5

Major PPT

79.6

0.67

0.8

73.8

36.8

Minor 5ss

32.5

-2

2.7

35.6

40.5

Minor BPS

44.2

-0.3

58.46

44.7

Associated Gene:

Gene:

SHC4

Ensembl Gene ID:

ENSAPLG00000004896

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005091

1383412 - 1414568

31157