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Intron Name: Anas_platyrhynchos_platyrhynchos_11_14070868_14120771_F

Intron Information:

Intron Rank:

139022

Intron Class:

major

Intron Phase:

Intron Coordinates:

14070868 - 14120771

Intron Length:

49904

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGGG

5'SS Class:

strong_major

3'SS Sequence:

CCTTGTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTGAC

U12 Branch Point Sequence:

CCTGCCTGACGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

68.8

42.3

Major BPS

51.1

0.03

1.2

39.9

Major PPT

85.1

0.79

0.8

79.6

32.3

Minor 5ss

38.2

-1.3

3.1

49.2

47.1

Minor BPS

44.3

-0.3

2.1

59.75

49.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024844

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020419

14070008 - 14121107

51100